Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926407.1_cds_XP_016474430.1_66457
CDS Infomation

[gene=LOC107796197] [db_xref=GeneID:107796197] [protein=FRIGIDA-like protein 4a] [protein_id=XP_016474430.1] [location=complement(join(36241..36891,37531..37706,38783..39159,40510..40994))] [gbkey=CDS]
Sequence

ATGGCGGCAGATACTGCTACCAACCCTGACCGGATACATGCCTTCTTCAGCAACCTCGAG
TCCCGGAAAACCCTACTGGCCACCGTCACCGACCTCCACAAAACCCTAACCACCCACTTC
ACCAACATCGACAAAACCCTCTCCCAGAAATCCGAAACCCTCGACAACCAAATCAAATCC
TTCAAGGAAAACACCGAAAATGCCCTCCTGAAGCTCCAGAATCGCGAGAATGCCCTCCCC
GACATAGAATCCGGCATGGCCGCTTTCATCGCGGAGAAGAAGGACGCCGCCGTCTCGGAG
ATTGAGAATGCTGCTGAGGGTTTGGGGGATTTGAGCGAGAAGAGCTTGGCCGAAGTGCTG
AGGATTTACTGTAGAAGAATGGATGCCAGCGGCCTCGTTAGATTCCTTCAGACGAAGCGA
AAGGAATCTACTGGTTTGAGGACGGAGATTGTTGCTGCCCTTGACACTTCCGTTGACCCA
ATGAGGTTGATCTTGGATGCTGCAGAGGAGTTTGTGGGGATGAAGGTAGAGGGGAAGATG
ATAGGGGCAGATAGGAGGTGGGCATGTGATATGTTAGTTCAGTCAGTTGGGCCAGTTGTG
GAAGGGGGTTATGGTGCGGGGAGGAGTTTGAAGGAGAGGGCAGCAAGGGTGTTGGAGAAA
TGGAAGGGAGTTTTGGGTAGTGGGGACAGGACCAGTGGAGTATGCGCTGCTGAAGCAACA
ATGTTTTTGCAGTTGGTTATATCATTTGCACTAAAAGAGAGGTTTGAAGAGGAGTTCCTA
AGGAAGCTGGTGATGGAGTTTGCTAACAGGAAAGATATGCCAAAGCTTGCGGTTGCCTTT
GGATTTGGGAACAAAATAGTGGATATTATTGAAGAGCTGGTGAAGAGCGGCAAAGAGGTT
GAAGCAGTATATTTTGCTTACGAGTCGGGATTAGCAGAGCGATTCCCTCCAGTCTCACTT
CTTAAGGCATATCTTAGGAACTGTCGAAGAAATTCTAATAACATATCAAAGAAGGGAAGA
TTTAGTTCAGCTGCAGTGGACAAAGCTAACATCATAGAGTGGGAAGCCACTAAGGCTATA
ATAAAATGTGTGGAAGATCACAAGCTTGAACAAGAATTTTCTTTGGAAGGACTTAAAAAA
CGGGTGACAGAGTTGGAGCAGTCCAGAGCAAAAAGGAAAAAGGGCACAGCTCCTGGGCAC
AAGCATTCAAAAAAGCGGGGCCGTGGAAGTGGCTCTGGCAAGGCCAGTGACCAGTCCACC
TCTCGGCCTGTTAAATCTGGAAGATTGTCGAATGCGTCTCCTTCTTTCCGCTCCAGGAAT
CCTCCTCCATCACATCAAGTGCCACCAGTTAGATATACAGGAGCACATAGCTATACCAGC
CAGAGTGTATACGAGGCACCTAGCACGGTCTCATATGCTCCAGCTTATAGTGGAACCCAC
ACCACAAGTCCGGCTGCACTTCCTCCACAATATGGATATGCAATTCAAGAAACTGGAGCT
TATAGCGGAACTCACACCCAAAGTACAGCTGCACTTCCTCCACAATATGGATATGCACTG
CAAGAAGCCGGAGTTAGTGGAGTGCGGAGTTATCCTGGATCCTATGGAGGGCAGAGTGGT
TATAGTGCATATGATTATACTCTTACTGCTACTGCTTCTGCATACCCACCTTCATATCCC
CCGCAGTAG

Peptide Sequence

PEP ID

XP_016474430.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 4a [Nicotiana tabacum]
Sequence

MAADTATNPDRIHAFFSNLESRKTLLATVTDLHKTLTTHFTNIDKTLSQKSETLDNQIKS
FKENTENALLKLQNRENALPDIESGMAAFIAEKKDAAVSEIENAAEGLGDLSEKSLAEVL
RIYCRRMDASGLVRFLQTKRKESTGLRTEIVAALDTSVDPMRLILDAAEEFVGMKVEGKM
IGADRRWACDMLVQSVGPVVEGGYGAGRSLKERAARVLEKWKGVLGSGDRTSGVCAAEAT
MFLQLVISFALKERFEEEFLRKLVMEFANRKDMPKLAVAFGFGNKIVDIIEELVKSGKEV
EAVYFAYESGLAERFPPVSLLKAYLRNCRRNSNNISKKGRFSSAAVDKANIIEWEATKAI
IKCVEDHKLEQEFSLEGLKKRVTELEQSRAKRKKGTAPGHKHSKKRGRGSGSGKASDQST
SRPVKSGRLSNASPSFRSRNPPPSHQVPPVRYTGAHSYTSQSVYEAPSTVSYAPAYSGTH
TTSPAALPPQYGYAIQETGAYSGTHTQSTAALPPQYGYALQEAGVSGVRSYPGSYGGQSG
YSAYDYTLTATASAYPPSYPPQ

Transcript Sequence

Gene sequence data has not been registered.